Introduction
In this tutorial we learn how to install bamkit on Ubuntu 22.04.
What is bamkit
bamkit is:
This package provides some Python3 tools for common BAM file
manipulations.
There are three methods to install bamkit on Ubuntu 22.04. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install bamkit Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install bamkit using apt-get by running the following command:
sudo apt-get -y install bamkit
Install bamkit Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install bamkit using apt by running the following command:
sudo apt -y install bamkit
Install bamkit Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install bamkit using aptitude by running the following command:
sudo aptitude -y install bamkit
How To Uninstall bamkit on Ubuntu 22.04
To uninstall only the bamkit package we can use the following command:
sudo apt-get remove bamkit
Uninstall bamkit And Its Dependencies
To uninstall bamkit and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:
sudo apt-get -y autoremove bamkit
Remove bamkit Configurations and Data
To remove bamkit configuration and data from Ubuntu 22.04 we can use the following command:
sudo apt-get -y purge bamkit
Remove bamkit configuration, data, and all of its dependencies
We can use the following command to remove bamkit configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge bamkit
References
Summary
In this tutorial we learn how to install bamkit package on Ubuntu 22.04 using different package management tools: apt, apt-get and aptitude.
