Introduction
In this tutorial we learn how to install clonalorigin on Kali Linux.
What is clonalorigin
clonalorigin is:
Bacteria, unlike us, can reproduce on their own. They do however have
mechanisms that transfer DNA between organisms, a process more formally
known as recombination. The mechanisms by which recombination takes
place have been studied extensively in the laboratory but much remains
to be understood concerning how, when and where recombination takes
place within natural populations of bacteria and how it helps them to
adapt to new environments. ClonalOrigin performs a comparative analysis
of the sequences of a sample of bacterial genomes in order to
reconstruct the recombination events that have taken place in their
ancestry.
There are three methods to install clonalorigin on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install clonalorigin Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get updateAfter updating apt database, We can install clonalorigin using apt-get by running the following command:
sudo apt-get -y install clonaloriginInstall clonalorigin Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install clonalorigin using apt by running the following command:
sudo apt -y install clonaloriginInstall clonalorigin Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.
sudo aptitude updateAfter updating apt database, We can install clonalorigin using aptitude by running the following command:
sudo aptitude -y install clonalorigin
How To Uninstall clonalorigin on Kali Linux
To uninstall only the clonalorigin package we can use the following command:
sudo apt-get remove clonalorigin
Uninstall clonalorigin And Its Dependencies
To uninstall clonalorigin and its dependencies that are no longer needed by Kali Linux, we can use the command below:
sudo apt-get -y autoremove clonalorigin
Remove clonalorigin Configurations and Data
To remove clonalorigin configuration and data from Kali Linux we can use the following command:
sudo apt-get -y purge clonalorigin
Remove clonalorigin configuration, data, and all of its dependencies
We can use the following command to remove clonalorigin configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge clonalorigin
Dependencies
clonalorigin have the following dependencies:
References
Summary
In this tutorial we learn how to install clonalorigin package on Kali Linux using different package management tools: apt, apt-get and aptitude.
